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    Senior Bioinformatics Scientist 1 - Cambridge, United Kingdom - Revvity

    Revvity
    Revvity Cambridge, United Kingdom

    1 week ago

    Default job background
    Description

    We have an exciting opportunity for an experienced bioinformatician who is interested in working at the forefront of the gene editing (CRISPR knock-out, base editing) and gene modulation (CRISPRa, CRISPRi, RNAi) fields. As a Senior Bioinformatics Scientist 1, you will have the opportunity to apply your strong bioinformatics background and software development skills to make key contributions in support of a wide variety of Revvity products and services including screening services, base editing research, whole genome CRISPR/RNAi reagents, and diagnostics reference standards.

    In this role, you will work closely with scientists, software engineers, product managers, and other bioinformaticians to support and drive cutting edge research products and services. If you are an experienced bioinformatician, are fulfilled by working on challenging problems, and enjoy being part of a vibrant team, this role is for you

    Key Responsibilities

  • Work as part of an Agile development team to develop, test, document, and support bioinformatics pipelines and tools (primarily Python with some C# and R)
  • Help manage complex projects by gathering user requirements and breaking them into technical tasks for the team
  • Mentor junior group members and provide high-level guidance on software architecture, bioinformatics, and scientific approach to problems
  • Provide expert feedback on new code through pull requests
  • Drive collaboration with scientists, product managers, software engineers, and other internal stakeholders to understand and address the complex, emerging needs of our business and customers
  • Prepare and present high quality data packages and reports to internal/external clients
  • Help drive innovation within the bioinformatics group and company by suggesting new areas of research/development

    • Essential Competencies & Requirements

  • At least 3 years' relevant experience post-PhD (or equivalent experience) in bioinformatics, computational biology, molecular biology, chemistry, physics, statistics, computer science, or a related field
  • Bioinformatics expertise – experienced in using standard tools and common data sources
  • Experience with software development 3+ years' experience in Python development Experience creating and querying databases (e.g. PostgreSQL) Advanced knowledge of Git Experience with unit testing, test-driven development and Python testing libraries Experience developing user-facing software (command-line, web app)

    • Desirable Competencies & Requirements

  • Experience working as part of Agile development team
  • Familiarity with cloud development and resources (Azure, AWS); Linux & HPC experience a plus
  • Experience working in Flask (or another Python web framework)
  • Experience with Docker and writing Dockerfiles
  • Experience with CI/CD (Jenkins, CircleCI, Azure Pipelines etc.)
  • Familiarity with common Python development tools (e.g. pyenv, poetry, tox)
  • Experience developing NGS analysis pipelines
  • Intermediate to advanced experience developing in a language other than Python (especially R or C#)
  • Familiarity with common gene and variant annotation data sources (e.g. NCBI, COSMIC)
  • Able to work independently and deliver high quality results while managing multiple simultaneous projects
  • Excellent interpersonal and communication skills, both written and verbal
  • Team player – enjoys collaborating with others to achieve shared goals and objectives

    • #LI-EMEA

    #LI-Hybrid

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